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Harnessing Natural Cellular Variability to Understand How Alternative Splicing Controls Neuronal Polarity

Harnessing natural cellular variability to understand how alternative splicing controls neuronal polarity

Neurons are exceptionally polar – their different parts possess utterly distinct structural and functional attributes. Axons and dendrites are two such polar specialisations, whose segregation early in development depends upon alternative splicing (AS) of key mRNAs. How AS contributes to the subsequent maintenance of neuronal polarity, however, remains unknown. To answer this question, this project will use state-of-the-art bioinformatic, molecular and neurophysiological tools at the single-cell level. We will leverage natural variation within a distinct neuronal population to understand how AS can influence neuronal polarity across time and space, gaining fundamental insight into processes that are crucial for normal brain function.

Disciplines and Techniques
Project supervisor/s
Dr. Matthew Grubb
Matthew is interested in brain development, especially those processes of neuronal maturation which are shaped by electrical activity.
King's College London
Dr. Eugene Makeyev
Eugene is interested in the role of post-transcriptional RNA processing in eukaryotic gene regulation.
King's College University
References
Embryonic and postnatal neurogenesis produce functionally distinct subclasses of dopaminergic neuron
Galliano E, Franzoni E, Breton M, Chand AN, Byrne DJ, Murthy VN, Grubb MS
eLife, 7:e32373. https://doi.org/10.7554/eLife.32373
2018
Polarizing the Neuron through Sustained Co-expression of Alternatively Spliced Isoforms
Yap K, Xiao Y, Friedman BA, Je HS, and Makeyev EV.
Cell Rep. 15:1316-1328. https://doi.org/10.1016/j.celrep.2016.04.012
2016
A mechanism underlying position-specific regulation of alternative splicing
Hamid FM and Makeyev EV
Nucleic Acids Res 45:12455-12468. https://academic.oup.com/nar/article/45/21/12455/4372489
2017
A distinct subtype of dopaminergic interneuron displays inverted structural plasticity at the axon initial segment
Chand AN, Galliano E, Chesters RA, Grubb MS
J Neurosci, 35:1573-90. https://doi.org/10.1523/JNEUROSCI.3515-14
2015
A Short Tandem Repeat-Enriched RNA Assembles a Nuclear Compartment to Control Alternative Splicing and Promote Cell Survival
Yap K, Mukhina S, Zhang G, Tan JSC, Ong HS, and Makeyev EV
Mol Cell 72:525-540. https://doi.org/10.1016/j.molcel.2018.08.0
2018